| | Publication Year | Title | Author(s) |
| 1 | 3-Dec-2021 | Emergence and global spread of Listeria monocytogenes main clinical clonal complex. | Moura, Alexandra; Lefrancq, Noémie; Wirth, Thierry; Leclercq, Alexandre; Borges, Vítor; Gilpin, Brent; Dallman, Timothy J; Frey, Joachim; Franz, Eelco; Nielsen, Eva M; Thomas, Juno; Pightling, Arthur; Howden, Benjamin P ; Tarr, Cheryl L; Gerner-Smidt, Peter; Cauchemez, Simon; Salje, Henrik; Brisse, Sylvain; Lecuit, Marc |
| 2 | Nov-2021 | Key parameters for genomics-based real-time detection and tracking of multidrug-resistant bacteria: a systematic analysis. | Gorrie, Claire L; Da Silva, Anders Gonçalves; Ingle, Danielle J; Higgs, Charlie; Seemann, Torsten; Stinear, Timothy P; Williamson, Deborah A; Kwong, Jason C ; Grayson, M Lindsay ; Sherry, Norelle L ; Howden, Benjamin P |
| 3 | 20-Oct-2021 | Daptomycin Resistance Occurs Predominantly in vanA-Type Vancomycin-Resistant Enterococcus faecium in Australasia and Is Associated With Heterogeneous and Novel Mutations. | Li, Lucy; Higgs, Charlie; Turner, Adrianna M; Nong, Yi; Gorrie, Claire L; Sherry, Norelle L ; Dyet, Kristin H; Seemann, Torsten; Williamson, Deborah A; Stinear, Timothy P; Howden, Benjamin P ; Carter, Glen P |
| 4 | Oct-2021 | Low-Cost, Open-Source Device for High-Performance Fluorescence Detection of Isothermal Nucleic Acid Amplification Reactions. | Buultjens, Andrew H; Vandelannoote, Koen; Sharkey, Liam K; Howden, Benjamin P ; Monk, Ian R; Lee, Jean Y H; Stinear, Timothy P |
| 5 | 20-Sep-2021 | Genomic epidemiology and antimicrobial resistance mechanisms of imported typhoid in Australia. | Ingle, Danielle J; Andersson, Patiyan; Valcanis, Mary; Wilmot, Mathilda; Easton, Marion; Lane, Courtney; Barden, Jessica; da Silva, Anders Gonçalves; Seemann, Torsten; Horan, Kristy; Ballard, Susan A; Sherry, Norelle L ; Williamson, Deborah A; Howden, Benjamin P |
| 6 | 13-Sep-2021 | Accessible Platform for High-Throughput COVID-19 Molecular Diagnostics and Genome Sequencing Using a Repurposed 3D Printer for RNA Extraction. | Vandelannoote, Koen; Buultjens, Andrew H; Li, Lucy; Sharkey, Liam K; Herisse, Marion; Pidot, Sacha J; Hoang, Tuyet; Howden, Benjamin P ; Monk, Ian R; Seemann, Torsten; Lee, Jean Y H; Stinear, Timothy P |
| 7 | Sep-2021 | Defective Severe Acute Respiratory Syndrome Coronavirus 2 Immune Responses in an Immunocompromised Individual With Prolonged Viral Replication. | Gordon, Claire L ; Smibert, Olivia C ; Holmes, Natasha E ; Chua, Kyra Y L ; Rose, Morgan T ; Drewett, George P ; James, Fiona L ; Mouhtouris, Effie ; Nguyen, Thi H O; Zhang, Wuji; Kedzierski, Lukasz; Rowntree, Louise C; Chua, Brendon Y; Caly, Leon; Catton, Mike G; Druce, Julian; Sait, Michelle; Seemann, Torsten; Sherry, Norelle L ; Howden, Benjamin P ; Kedzierska, Katherine; Kwong, Jason C ; Trubiano, Jason |
| 8 | Sep-2021 | A multi-institutional outbreak of New Delhi metallo-β-lactamase-producing Escherichia coli with subsequent acquisition of the Klebsiella pneumoniae carbapenemase gene. | Solter, Ester; Kwong, Jason C ; Walton, Aaron; Sherry, Norelle L ; Howden, Benjamin P ; Grayson, M Lindsay ; Schwartz, David; Temkin, Elizabeth; Frenk, Sammy; Carmeli, Yehuda; Schwaber, Mitchell J |
| 9 | May-2021 | Pilot study of a combined genomic and epidemiologic surveillance program for hospital-acquired multidrug-resistant pathogens across multiple hospital networks in Australia. | Sherry, Norelle L ; Lee, Robyn S; Gorrie, Claire L; Kwong, Jason C ; Stuart, Rhonda L; Korman, Tony M; Marshall, Caroline; Higgs, Charlie; Chan, Hiu Tat; Graham, Maryza; Johnson, Paul D R ; Leroi, Marcel J ; Reed, Caroline; Richards, Michael J; Slavin, Monica A; Worth, Leon J; Howden, Benjamin P ; Grayson, M Lindsay |
| 10 | Apr-2021 | Multi-site assessment of rapid, point-of-care antigen testing for the diagnosis of SARS-CoV-2 infection in a low-prevalence setting: A validation and implementation study. | Muhi, Stephen; Tayler, Nick; Hoang, Tuyet; Ballard, Susan A; Graham, Maryza; Rojek, Amanda; Kwong, Jason C ; Trubiano, Jason ; Smibert, Olivia C ; Drewett, George P ; James, Fiona L ; Gardiner, Emma; Chea, Socheata; Isles, Nicole; Sait, Michelle; Pasricha, Shivani; Taiaroa, George; McAuley, Julie; Williams, Eloise; Gibney, Katherine B; Stinear, Timothy P; Bond, Katherine; Lewin, Sharon R; Putland, Mark; Howden, Benjamin P ; Williamson, Deborah A |
| 11 | 16-Mar-2021 | Genomic Insights Into Last-Line Antimicrobial Resistance in Multidrug-Resistant Staphylococcus and Vancomycin-Resistant Enterococcus. | Turner, Adrianna M; Lee, Jean Y H; Gorrie, Claire L; Howden, Benjamin P ; Carter, Glen P |
| 12 | Mar-2021 | Clinical manifestations of invasive meningococcal disease in Victoria with the emergence of serogroup W and serogroup Y Neisseria meningitidis. | Birrell, Michael T ; Strachan, Janet; Holmes, Natasha E ; Stevens, Kerrie; Howden, Benjamin P ; Franklin, Lucinda J; Ivan, Mihaela; Kwong, Jason C |
| 13 | 2021 | Search and Contain: Impact of an integrated genomic and epidemiological surveillance and response program for control of carbapenemase-producing Enterobacterales. | Lane, Courtney R; Brett, Judith; Schultz, Mark; Gorrie, Claire L; Stevens, Kerrie; Cameron, Donna R M; St George, Siobhan; van Diemen, Annaliese; Easton, Marion; Stuart, Rhonda L; Sait, Michelle; Peleg, Anton Y; Stewardson, Andrew J; Cheng, Allen C; Spelman, Denis W; Waters, Mary Jo; Ballard, Susan A; Sherry, Norelle L ; Williamson, Deborah A; Romanes, Finn; Sutton, Brett; Kwong, Jason C ; Seemann, Torsten; Goncalves da Silva, Anders; Stephens, Nicola; Howden, Benjamin P |
| 14 | 2021 | Multi-site point of care assessment of Abbott ID NOW rapid molecular test for SARS-CoV-2 in a low-prevalence setting. | Graham, Maryza; Muhi, Stephen; Hoang, Tuyet; Ballard, Susan A; McAuley, Julie; Kwong, Jason C ; Williamson, Deborah A; Howden, Benjamin P |